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  5. Dde_g00622

Dde_g00622


Description : storage vacuole protein sorting receptor *(RMR) & original description: none


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00622

Target Alias Description ECC score Gene Family Method Actions
AT5G66160 RMR1, ATRMR1 receptor homology region transmembrane domain ring H2... 0.03 OrthoFinder output from all 47 species
Ceric.35G025600.1 Ceric.35G025600 storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Ehy_g05657 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 233 276
IPR003137 PA_domain 62 141
No external refs found!