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  5. Dde_g00407

Dde_g00407


Description : deubiquinating protease *(OTU1) & original description: none


Gene families : OG0004446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00407
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00097180 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
AT1G28120 No alias CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain... 0.03 OrthoFinder output from all 47 species
Cba_g29363 No alias deubiquinating protease *(OTU1) & original description: none 0.03 OrthoFinder output from all 47 species
Cre10.g441500 No alias Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Nbi_g01881 No alias deubiquinating protease *(OTU1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08678 No alias deubiquinating protease *(OTU1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR019400 Peptidase_C65_otubain 28 277
No external refs found!