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  5. Dde_g00267

Dde_g00267


Description : translation elongation factor *(EF-P) & original description: none


Gene families : OG0006339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00267
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT3G08740 No alias elongation factor P (EF-P) family protein 0.03 OrthoFinder output from all 47 species
Aob_g02958 No alias translation elongation factor *(EF-P) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0359.g066840 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Cba_g38579 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Dac_g00411 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g11332 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g00568 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01030181001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os11g02450.1 LOC_Os11g02450 EF-P translation elongation factor 0.03 OrthoFinder output from all 47 species
Mp4g02120.1 No alias EF-P translation elongation factor 0.02 OrthoFinder output from all 47 species
Nbi_g06931 No alias translation elongation factor *(EF-P) & original... 0.05 OrthoFinder output from all 47 species
Ore_g18750 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Solyc10g075020.3.1 Solyc10g075020 EF-P translation elongation factor 0.06 OrthoFinder output from all 47 species
Spa_g11669 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Tin_g16258 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e039313_P003 Zm00001e039313 EF-P translation elongation factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001059 Transl_elong_P/YeiP_cen 117 167
IPR013185 Transl_elong_KOW-like 49 106
IPR015365 Elong-fact-P_C 175 230
No external refs found!