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  5. Aop_g70766

Aop_g70766 (ARLIM15, DMC1, ATDMC1)


Aliases : ARLIM15, DMC1, ATDMC1

Description : recombinase *(DMC1) & original description: none


Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g70766
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0094.g043383 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.03 OrthoFinder output from all 47 species
LOC_Os12g04980.1 ARLIM15, DMC1,... recombinase (DMC1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0019310 inositol catabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
MF GO:0050113 inositol oxygenase activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 32 274
No external refs found!