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Description : cohesin cofactor *(PDS5) & original description: none
Gene families : OG0000616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000616_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g69987 | |
| Cluster | HCCA: Cluster_328 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g022401 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06778 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18795 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g11522 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20243 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g03900 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07435 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009277 | No alias | cohesin cofactor *(PDS5) & original description: CDS=453-4370 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037833 | No alias | cohesin cofactor *(PDS5) & original description: CDS=1-5502 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04527 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G009800.1 | Ceric.34G009800 | cohesin cofactor *(PDS5) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G021700.1 | Ceric.37G021700 | cohesin cofactor *(PDS5) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000076.96 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g29223 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14818 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g36421 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01002824001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008876001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023587001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035890001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02487 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09525 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23673 | No alias | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g39920.1 | LOC_Os02g39920 | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g21353 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g46602 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g09667 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g10229 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g13850.1 | No alias | cohesin cofactor (PDS5) | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g18971 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04827 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18717 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14289 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g16328 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g59813 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0105.g020186 | No alias | exoribonuclease *(SOV) & original description: CDS=109-2307 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18018 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24524 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33477 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g34354 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35729 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g116973.1.1 | Solyc03g116973 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g09451 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g18111 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11324 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015094_P002 | Zm00001e015094 | cohesin cofactor (PDS5) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030989_P001 | Zm00001e030989 | cohesin cofactor (PDS5) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036853_P003 | Zm00001e036853 | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |