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  5. Lfl_g15596

Lfl_g15596 (ATSDAT, TDT, ATTDT)


Aliases : ATSDAT, TDT, ATTDT

Description : not classified & original description: none


Gene families : OG0002920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g15596

Target Alias Description ECC score Gene Family Method Actions
Als_g15361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G023800.1 Ceric.15G023800 not classified & original description: pacid=50639519... 0.02 OrthoFinder output from all 47 species
Dde_g02876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013256 Chromatin_SPT2 648 739
IPR001898 SLC13A/DASS 70 202
No external refs found!