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  5. Aop_g68980

Aop_g68980 (RBCS1A)


Aliases : RBCS1A

Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none


Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g68980

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0149.g053208 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
GSVIVT01029221001 RBCS1A Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Lfl_g32549 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Msp_g41232 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Msp_g43344 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Nbi_g30940 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ore_g35122 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Pp3c4_11770V3.1 RBCS1A, Pp3c4_11770 Ribulose bisphosphate carboxylase (small chain) family protein 0.02 OrthoFinder output from all 47 species
Ppi_g01698 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Solyc07g017950.3.1 RBCS1A, Solyc07g017950 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 61 168
No external refs found!