Aop_g68966 (ATARFA1F, ARFA1F)

Aliases : ATARFA1F, ARFA1F

Description : ARF-GTPase *(ARF1) & original description: none

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g68966

Target	Alias	Description	ECC score	Gene Family Method
AT5G14670	ATARFA1B, ARFA1B	ADP-ribosylation factor A1B	0.04	OrthoFinder output from all 47 species
Als_g12686	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g69136	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g71009	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g23069	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g31478	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g14560.1	ATARFA1F, ARFA1F	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Ore_g06306	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g31931	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c10_25070V3.1	ATARFA1F,...	ADP-ribosylation factor A1F	0.02	OrthoFinder output from all 47 species
Tin_g39216	ARF1A1C	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	6	177

External Links

No external refs found!