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  5. Aop_g68122

Aop_g68122


Description : not classified & original description: none


Gene families : OG0014333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014333_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g68122
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
Ceric.33G068000.1 VAC1, ECB2,... not classified & original description: pacid=50607440... 0.06 OrthoFinder output from all 47 species
Dac_g04695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44150 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13557 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g42139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 486 533
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 77 124
IPR002885 Pentatricopeptide_repeat 281 327
IPR002885 Pentatricopeptide_repeat 383 430
IPR002885 Pentatricopeptide_repeat 460 482
No external refs found!