Aliases : ATLIG1, LIG1
Description : EC_6.5 ligase forming phosphoric ester bond & original description: none
Gene families : OG0001904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g109165 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Als_g01152 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000754.31 | ATLIG1, LIG1 | DNA ligase 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g17352 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
MA_10044742g0010 | ATLIG1, LIG1 | DNA ligase 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g19800 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g16105 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g33229 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g18058 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g07751 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e020139_P002 | AtLIG6, LIG6,... | DNA ligase (LIG6) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003910 | DNA ligase (ATP) activity | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
BP | GO:0006310 | DNA recombination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | HCCA |
CC | GO:0000782 | telomere cap complex | IEP | HCCA |
CC | GO:0000783 | nuclear telomere cap complex | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005680 | anaphase-promoting complex | IEP | HCCA |
BP | GO:0007346 | regulation of mitotic cell cycle | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
BP | GO:0033045 | regulation of sister chromatid segregation | IEP | HCCA |
MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
MF | GO:0042393 | histone binding | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0051983 | regulation of chromosome segregation | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | HCCA |
BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
CC | GO:1990879 | CST complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |