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  5. Aop_g64875

Aop_g64875 (BOS1, AtMYB108, MYB108)


Aliases : BOS1, AtMYB108, MYB108

Description : MYB class-R2R3 subgroup-19/20 transcription factor & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g64875

Target Alias Description ECC score Gene Family Method Actions
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 OrthoFinder output from all 47 species
AT3G11440 ATMYB65, MYB65 myb domain protein 65 0.05 OrthoFinder output from all 47 species
Adi_g021584 AtMYB20, MYB20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g65370.1 ATMYB4, MYB4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g20090.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50770.1 MYB58, ATMYB58,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37970.1 AtMYB93, MYB93,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_10434028g0010 ATMYB21, MYB21, ATMYB3 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_230300g0010 ATMYB4, MYB4 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_80033g0010 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Mp1g13010.1 DUO1 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Mp3g07510.1 MYB3, ATMYB3 transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc10g005240.3.1 ATY53, ATMYB67,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc11g065840.3.1 AtMYB83, MYB83,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e010995_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e032298_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 89 132
IPR001005 SANT/Myb 36 83
No external refs found!