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  5. Aop_g63303

Aop_g63303 (PG1)


Aliases : PG1

Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g63303
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT1G70370 PG2 polygalacturonase 2 0.03 OrthoFinder output from all 47 species
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.02 OrthoFinder output from all 47 species
Aev_g07719 PG2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29323 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38151 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04221 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g09492 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13543 PG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g19745 JP630, PG3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06653 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34468.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34471.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34476.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34479.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72190.t1 USPL1, ATUSPL1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72191.t1 USPL1, ATUSPL1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g00679 JP630, PG3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40724 USPL1, ATUSPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10463 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035686001 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035702001 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035703001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os06g13240.1 PG1, LOC_Os06g13240 BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os08g29200.1 PG2, LOC_Os08g29200 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species
Len_g23146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10182290g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_462957g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_79669g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_8888577g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11951 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12181 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g53534 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60183 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011800 ATRD22, RD22 not classified & original description: CDS=1-1551 0.03 OrthoFinder output from all 47 species
Sam_g06268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g109500.4.1 USPL1, ATUSPL1,... BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g062300.3.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc02g062310.1.1 Solyc02g062310 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc02g062313.1.1 ATRD22, RD22,... BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Solyc02g062317.1.1 ATRD22, RD22,... BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Spa_g12001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05891 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39166 JP630, PG3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003438_P003 ATRD22, RD22,... Protein RAFTIN 1A OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Zm00001e003891_P006 Zm00001e003891 BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e029096_P002 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 118 332
No external refs found!