Aop_g63006 (PDR6, ATPDR6)

Aliases : PDR6, ATPDR6

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g63006

Target	Alias	Description	ECC score	Gene Family Method
AT1G59870	PEN3, ABCG36,...	ABC-2 and Plant PDR ABC-type transporter family protein	0.02	OrthoFinder output from all 47 species
AT4G15215	ATPDR13, PDR13	pleiotropic drug resistance 13	0.03	OrthoFinder output from all 47 species
Als_g47419	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g03117	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g06778	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g14195	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g16447	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g37548	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.04G041200.1	PDR6, ATPDR6,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Cre17.g728400	PEN3, ABCG36,...	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum	0.03	OrthoFinder output from all 47 species
Dcu_g08318	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01034746001	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
LOC_Os01g42350.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os09g16290.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
MA_10426781g0010	PDR4, ATPDR4	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_135152g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp1g25350.1	ATPDR7, PDR7	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Ore_g22919	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g18638	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g38837	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g57903	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g11094	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Solyc08g067620.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc12g019620.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc12g019640.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Spa_g45075	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g56174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.08	OrthoFinder output from all 47 species
Zm00001e024257_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e026148_P001	PDR6, ATPDR6,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e027850_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e033689_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e039353_P001	PIS1, ABCG37,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR029481	ABC_trans_N	47	149
IPR003439	ABC_transporter-like_ATP-bd	174	356
IPR013581	PDR_assoc	727	793
IPR013525	ABC_2_trans	512	722
IPR043926	ABCG_dom	389	442
IPR003439	ABC_transporter-like_ATP-bd	909	986

External Links

No external refs found!

Aop_g63006 (PDR6, ATPDR6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation