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  5. Aop_g62850

Aop_g62850


Description : not classified & original description: none


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g62850

Target Alias Description ECC score Gene Family Method Actions
AT2G01170 BAT1 bidirectional amino acid transporter 1 0.06 OrthoFinder output from all 47 species
Aev_g23998 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Dac_g39810 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g71700.1 BAT1, LOC_Os01g71700 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g71720.1 BAT1, LOC_Os01g71720 gamma-aminobutyric acid transporter (GABP) 0.02 OrthoFinder output from all 47 species
LOC_Os01g71740.1 BAT1, LOC_Os01g71740 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
MA_6210082g0010 BAT1 Amino-acid permease BAT1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Ore_g15659 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Smo438585 BAT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Smo79753 BAT1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Smo95941 BAT1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Zm00001e018674_P001 BAT1, Zm00001e018674 gamma-aminobutyric acid transporter (GABP) 0.02 OrthoFinder output from all 47 species
Zm00001e018676_P002 BAT1, Zm00001e018676 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Zm00001e020885_P001 Zm00001e020885 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027841_P002 BAT1, Zm00001e027841 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 1 116
No external refs found!