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  5. Aop_g62449

Aop_g62449 (EBS)


Aliases : EBS

Description : component *(SHL/EBS) of PRC1 complex & original description: none


Gene families : OG0000671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g62449
Cluster HCCA: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
Adi_g025693 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07032 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G075800.1 EBS, Ceric.06G075800 component *(SHL/EBS) of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Len_g03696 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033007_P001 EBS, Zm00001e033007 component BAH of BAH-EMF1 Polycomb silencing complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 21 133
IPR019787 Znf_PHD-finger 138 186
No external refs found!