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  5. Aop_g61345

Aop_g61345 (ATPMEPCRB)


Aliases : ATPMEPCRB

Description : EC_3.1 hydrolase acting on ester bond & original description: none


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g61345
Cluster HCCA: Cluster_384

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00109420 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
AMTR_s00105p00078750 PME44, ATPME44,... Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
AMTR_s00129p00070300 PME1, ATPME1,... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT1G53840 PME1, ATPME1 pectin methylesterase 1 0.02 OrthoFinder output from all 47 species
AT3G10710 RHS12 root hair specific 12 0.02 OrthoFinder output from all 47 species
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 OrthoFinder output from all 47 species
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
Aev_g08266 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g09825 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g12203 PME1, ATPME1 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g27377 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Als_g08288 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g10654 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g11322 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05823.t1 Aspi01Gene05823 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene07382.t1 Aspi01Gene07382 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene07394.t1 Aspi01Gene07394 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene11209.t1 Aspi01Gene11209 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14986.t1 Aspi01Gene14986 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene39882.t1 Aspi01Gene39882 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene45094.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045942 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0215.g058412 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0472.g072937 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Azfi_s1989.g108563 No alias pectin methylesterase & original description: CDS=1-588 0.02 OrthoFinder output from all 47 species
Ceric.19G055900.1 Ceric.19G055900 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dac_g44370 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Dac_g45482 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Dcu_g11844 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dde_g20951 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01475 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04854 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01016667001 PME1, ATPME1 Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_10522 ATPME3, PME3 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_10523 ATPME3, PME3 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g15039.1 LOC_Os01g15039 pectin methylesterase 0.01 OrthoFinder output from all 47 species
LOC_Os01g57854.1 ATPMEPCRA,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g65790.1 LOC_Os01g65790 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os02g18650.1 LOC_Os02g18650 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os02g54190.1 PME61, LOC_Os02g54190 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os06g09340.1 LOC_Os06g09340 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os07g47830.1 ATPME3, PME3,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os08g34900.1 LOC_Os08g34900 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_10372207g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_10435891g0010 PME61 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_130858g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_133919g0010 ATPMEPCRB pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_18093g0010 ATPMEPCRA, PMEPCRA Pectinesterase 2.1 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Mp6g15150.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Msp_g13826 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Msp_g25874 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Nbi_g12022 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Nbi_g19805 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g32251 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Pir_g09647 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pnu_g29006 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010222 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018433 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021277 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Sam_g07927 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Solyc02g014300.2.1 Solyc02g014300 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc03g083870.4.1 Solyc03g083870 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc03g123620.4.1 PME1, ATPME1,... pectin methylesterase 0.01 OrthoFinder output from all 47 species
Solyc07g017600.3.1 PME44, ATPME44,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g13204 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41609 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e017514_P001 ATPMEPCRB, Zm00001e017514 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Zm00001e017515_P001 ATPME2, PME2,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e019069_P001 Zm00001e019069 pectin methylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 1 242
No external refs found!