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  5. Aop_g60006

Aop_g60006


Description : not classified & original description: none


Gene families : OG0004660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g60006

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00137690 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g053627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.36 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01000585001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_29597g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g17670.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g16740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006853_P001 Zm00001e006853 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007949 SDA1_C 485 850
IPR012977 SDA1_N 128 179
No external refs found!