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  5. Aop_g58788

Aop_g58788


Description : not classified & original description: none


Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g58788

Target Alias Description ECC score Gene Family Method Actions
Aev_g42686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49968 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52932.t1 Aspi01Gene52932 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71443.t2 Aspi01Gene71443 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_33942g0010 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_479847g0010 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g47863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05445 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g07665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g22013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010074 No alias not classified & original description: CDS=287-2170 0.03 OrthoFinder output from all 47 species
Spa_g50143 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g16342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001546_P001 Zm00001e001546 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e020869_P004 Zm00001e020869 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e024022_P001 Zm00001e024022 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e038256_P001 Zm00001e038256 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e039148_P001 Zm00001e039148 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 376 423
IPR025605 OST-HTH/LOTUS_dom 258 335
IPR018957 Znf_C3HC4_RING-type 645 683
IPR000571 Znf_CCCH 206 225
No external refs found!