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  5. Aop_g57675

Aop_g57675


Description : not classified & original description: none


Gene families : OG0007043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g57675
Cluster HCCA: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
Als_g13386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033725001 No alias Cactin OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_26930 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 674.0) 0.03 OrthoFinder output from all 47 species
Pir_g05927 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo107633 No alias Cactin OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc10g085410.3.1 Solyc10g085410 Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 696.0) 0.02 OrthoFinder output from all 47 species
Spa_g07915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019134 Cactin_C 561 685
IPR018816 Cactin_central 207 404
No external refs found!