AMTR_s00024p00102300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.50

Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG_01_0000911 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000911_tree ,
OG_02_0000834 (LandPlants) Phylogenetic Tree(s): OG_02_0000834_tree ,
OG_03_0001753 (SeedPlants) Phylogenetic Tree(s): OG_03_0001753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00102300
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g50780.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.03 Archaeplastida
Pp3c15_21830V3.1 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Archaeplastida
GSVIVT01030666001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 LandPlants
Mp3g17000.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.01 LandPlants
GSVIVT01030666001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 400 446
No external refs found!