AMTR_s00024p00098860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.49

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG_01_0000200 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000200_tree ,
OG_02_0000106 (LandPlants) Phylogenetic Tree(s): OG_02_0000106_tree ,
OG_03_0000058 (SeedPlants) Phylogenetic Tree(s): OG_03_0000058_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00098860
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT2G02080 IDD4, AtIDD4 indeterminate(ID)-domain 4 0.03 Archaeplastida
LOC_Os09g38340.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_92989g0010 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Pp3c1_20230V3.1 No alias indeterminate(ID)-domain 2 0.01 Archaeplastida
Pp3c2_20240V3.1 No alias indeterminate(ID)-domain 2 0.02 Archaeplastida
Solyc03g121660.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g074780.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e026143_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.01 LandPlants
Pp3c1_20230V3.1 No alias indeterminate(ID)-domain 2 0.01 LandPlants
Pp3c2_20240V3.1 No alias indeterminate(ID)-domain 2 0.02 LandPlants
Solyc09g074780.3.1 No alias C2H2 zinc finger transcription factor 0.04 LandPlants
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.01 SeedPlants
Solyc09g074780.3.1 No alias C2H2 zinc finger transcription factor 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!