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  5. AMTR_s00024p00073390

AMTR_s00024p00073390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.32

Description : Calmodulin OS=Solanum lycopersicum


Gene families : OG_01_0000031 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000031_tree ,
OG_02_0000412 (LandPlants) Phylogenetic Tree(s): OG_02_0000412_tree ,
OG_03_0036872 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00073390
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT2G27030 ACAM-2, CAM5 calmodulin 5 0.05 Archaeplastida
AT3G43810 CAM7 calmodulin 7 0.03 Archaeplastida
AT5G21274 ACAM-6, CAM6 calmodulin 6 0.03 Archaeplastida
Cpa|evm.model.tig00001388.4 No alias Caltractin OS=Scherffelia dubia 0.02 Archaeplastida
Cpa|evm.model.tig00001466.13 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00021720.13 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
GSVIVT01037418001 No alias Calmodulin-related protein OS=Petunia hybrida 0.03 Archaeplastida
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
LOC_Os05g41210.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
MA_10431603g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
AT2G27030 ACAM-2, CAM5 calmodulin 5 0.05 LandPlants
AT5G21274 ACAM-6, CAM6 calmodulin 6 0.03 LandPlants
GSVIVT01037418001 No alias Calmodulin-related protein OS=Petunia hybrida 0.03 LandPlants
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 LandPlants
LOC_Os05g41210.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 14 73
IPR011992 EF-hand-dom_pair 86 146
No external refs found!