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  5. Aop_g55113

Aop_g55113


Description : transcriptional co-regulator *(Pirin) & original description: none


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g55113
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00186610 evm_27.TU.AmTr_v1... Pirin-like protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
AT1G50590 No alias RmlC-like cupins superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G43120 No alias RmlC-like cupins superfamily protein 0.05 OrthoFinder output from all 47 species
Aop_g52061 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g33006 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01031671001 No alias Pirin-like protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Gb_37035 No alias Pirin-like protein OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
LOC_Os09g31120.1 LOC_Os09g31120 Pirin-like protein At1g50590 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g19670.1 No alias Pirin-like protein OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Pnu_g12267 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Smo446995 No alias Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Solyc09g098160.3.1 Solyc09g098160 Pirin-like protein OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc09g098180.4.1 Solyc09g098180 Pirin-like protein OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 196 299
IPR003829 Pirin_N_dom 49 142
No external refs found!