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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00241920 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00259690 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g46460,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00151990 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00155p00018120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003783 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036802 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074694 | EMB2261 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g42379 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g13433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38174 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14144 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05250 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g09077 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36480 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene22967.t2 | Aspi01Gene22967 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54509.t1 | Aspi01Gene54509 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene65088.t1 | Aspi01Gene65088 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009227 | No alias | not classified & original description: CDS=1-1950 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1423.g102903 | No alias | not classified & original description: CDS=1-2439 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G085300.1 | Ceric.09G085300 | not classified & original description: pacid=50587383... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z028800.1 | Ceric.1Z028800 | not classified & original description: pacid=50582143... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G011600.1 | Ceric.25G011600 | not classified & original description: pacid=50594012... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G048500.1 | Ceric.29G048500 | not classified & original description: pacid=50625078... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G071500.1 | Ceric.30G071500 | not classified & original description: pacid=50609206... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16073 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22650 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01030836001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g08120.1 | OTP81, LOC_Os01g08120 | RNA editing factor (OTP81) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g58330.1 | LPA66, LOC_Os02g58330 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g52475.1 | LOC_Os03g52475 | Pentatricopeptide repeat-containing protein At3g28660... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g63260.3 | LOC_Os03g63260 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g38190.2 | LOC_Os05g38190 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g08660.1 | LOC_Os06g08660 | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08837 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18930 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44793 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12344 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g14850 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g14933 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g14847 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22768 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g02370 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g21836 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32582 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g04419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16145 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30840 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g45358 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g003970 | No alias | not classified & original description: CDS=1-3009 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019259 | No alias | not classified & original description: CDS=1-1518 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019336 | No alias | not classified & original description: CDS=1-1245 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0170.g024361 | OTP84 | cyclin-dependent kinase inhibitor *(KRP/ICK) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0198.g025550 | No alias | not classified & original description: CDS=1-2784 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11203 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11676 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13791 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36708 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50801 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g005850.3.1 | Solyc07g005850 | Pentatricopeptide repeat-containing protein At4g30700... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g096680.1.1 | REME1, Solyc12g096680 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g02585 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 388 | 418 |
| IPR002885 | Pentatricopeptide_repeat | 259 | 281 |
| IPR002885 | Pentatricopeptide_repeat | 186 | 216 |
| IPR046848 | E_motif | 604 | 666 |
| IPR002885 | Pentatricopeptide_repeat | 285 | 331 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 124 |
| IPR002885 | Pentatricopeptide_repeat | 487 | 534 |
| No external refs found! |