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Description : not classified & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g14037 | |
| Cluster | HCCA: Cluster_135 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00266470 | SOC1, AGL20,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00015260 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G30260 | AGL79 | AGAMOUS-like 79 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G22950 | GL19, AGL19 | AGAMOUS-like 19 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G51860 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46452 | AGL104 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g05851 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G037100.1 | AGL13, Ceric.36G037100 | not classified & original description: pacid=50568619... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g15498 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008560001 | SOC1, AGL20, ATSOC1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027579001 | SOC1, AGL20, ATSOC1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037024001 | AGL62 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38922 | AGL6 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g01355.1 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g36924.1 | AGL16, LOC_Os02g36924 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g03070.1 | GL19, AGL19,... | MADS-box transcription factor 50 OS=Oryza sativa subsp.... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g23910.1 | AGL16, LOC_Os04g23910 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g38780.1 | AGL16, LOC_Os04g38780 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g11330.1 | SVP, AGL22,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g23980.1 | AGL16, LOC_Os06g23980 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g02780.1 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_100760g0010 | AGL8, FUL | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432817g0010 | SVP, AGL22 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_1090469g0010 | SOC1, AGL20, ATSOC1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_1170g0010 | AGL8, FUL | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_141872g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_16629g0010 | ANR1, AGL44 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_412147g0010 | SOC1, AGL20, ATSOC1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_5917g0010 | AGL9, SEP3 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_78010g0010 | SHP2, AGL5 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42911 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g019710.3.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g114840.3.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g059970.4.1 | PI, Solyc06g059970 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28690 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023825_P002 | SVP, AGL22,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038096_P002 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
| BP | GO:0006030 | chitin metabolic process | IEP | HCCA |
| BP | GO:0006032 | chitin catabolic process | IEP | HCCA |
| BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0046348 | amino sugar catabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |