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  5. Aop_g54113

Aop_g54113 (HTA7)


Aliases : HTA7

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g54113
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT5G59870 HTA6 histone H2A 6 0.03 OrthoFinder output from all 47 species
Adi_g011160 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011320 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043980 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078410 HTA13 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082134 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01852 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21356 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17952 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02581 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33311 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01994 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05349.t1 HTA6, Aspi01Gene05349 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10197.t1 RAT5, HTA1,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26194.t1 HTA6, Aspi01Gene26194 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044568 HTA6 histone *(H2A) & original description: CDS=1-438 0.04 OrthoFinder output from all 47 species
Azfi_s0678.g081837 HTA10 histone *(H2A) & original description: CDS=127-525 0.03 OrthoFinder output from all 47 species
Cba_g07967 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G072800.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50620340... 0.03 OrthoFinder output from all 47 species
Ceric.09G032900.1 HTA7, Ceric.09G032900 histone *(H2A) & original description: pacid=50587494... 0.02 OrthoFinder output from all 47 species
Ceric.26G005600.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50599432... 0.04 OrthoFinder output from all 47 species
Ceric.26G005800.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50599346... 0.04 OrthoFinder output from all 47 species
Ceric.28G045900.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50570258... 0.03 OrthoFinder output from all 47 species
Dac_g06100 HTA6 histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Gb_25326 GAMMA-H2AX,... histone (H2A) 0.04 OrthoFinder output from all 47 species
Len_g02525 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37716 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
MA_213048g0010 HTA7 histone (H2A) 0.03 OrthoFinder output from all 47 species
MA_74667g0010 HTA7 histone (H2A) 0.05 OrthoFinder output from all 47 species
Msp_g04700 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09279 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27681 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14792 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01820 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29875 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58817 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02237 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026322 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: CDS=44-520 0.03 OrthoFinder output from all 47 species
Sam_g48398 No alias histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15528 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17437 HTA10 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32347 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32923 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011643_P001 HTA6, Zm00001e011643 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e033014_P001 HTA6, Zm00001e033014 histone (H2A) 0.02 OrthoFinder output from all 47 species
Zm00001e034815_P001 HTA12, Zm00001e034815 histone (H2A) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 126 159
IPR007125 Histone_H2A/H2B/H3 34 123
No external refs found!