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  5. Aop_g53924

Aop_g53924


Description : not classified & original description: none


Gene families : OG0002472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g53924
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Adi_g051838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g35716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g60786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g61481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g62358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g41087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0009277 fungal-type cell wall IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002509 NODB_dom 153 260
No external refs found!