Lfl_g13947 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g13947

Target Alias Description ECC score Gene Family Method Actions
Adi_g018518 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07952 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g19837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30875 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33935 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55254 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03222 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008666 No alias not classified & original description: CDS=1-2997 0.04 OrthoFinder output from all 47 species
Azfi_s0084.g038899 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2004 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0254.g060427 No alias not classified & original description: CDS=1-2130 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Azfi_s2487.g111794 No alias not classified & original description: CDS=200-2266 0.04 OrthoFinder output from all 47 species
Cba_g05221 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07596 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07705 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19873 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29903 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46047 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75123 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G038700.1 Ceric.18G038700 not classified & original description: pacid=50621594... 0.03 OrthoFinder output from all 47 species
Ceric.1Z015700.1 VAC1, ECB2,... not classified & original description: pacid=50604577... 0.03 OrthoFinder output from all 47 species
Ceric.25G001500.1 Ceric.25G001500 not classified & original description: pacid=50593180... 0.03 OrthoFinder output from all 47 species
Ceric.36G034200.1 Ceric.36G034200 not classified & original description: pacid=50568019... 0.03 OrthoFinder output from all 47 species
Ceric.36G038100.1 Ceric.36G038100 not classified & original description: pacid=50568680... 0.03 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g09663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13741 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22240 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02322 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47068 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05005 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38946 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14001 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22932 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g49449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021475 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2172 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021576 No alias not classified & original description: CDS=1-3150 0.03 OrthoFinder output from all 47 species
Sam_g18164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18575 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 625 672
IPR002885 Pentatricopeptide_repeat 481 501
IPR002885 Pentatricopeptide_repeat 74 102
IPR002885 Pentatricopeptide_repeat 290 319
IPR002885 Pentatricopeptide_repeat 408 438
IPR002885 Pentatricopeptide_repeat 145 167
IPR002885 Pentatricopeptide_repeat 507 553
IPR002885 Pentatricopeptide_repeat 170 217
No external refs found!