Aop_g53257


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g53257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00135240 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00156p00066850 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g029282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32965 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g02750 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g26053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27534 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene05743.t1 Aspi01Gene05743 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05746.t1 Aspi01Gene05746 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene11108.t1 Aspi01Gene11108 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene23389.t1 Aspi01Gene23389 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene23389.t2 Aspi01Gene23389 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45294.t1 Aspi01Gene45294 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45306.t1 Aspi01Gene45306 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60159.t1 Aspi01Gene60159 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene72933.t1 Aspi01Gene72933 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g01982 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g18316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.02 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.01 OrthoFinder output from all 47 species
Dac_g35395 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g19573 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g56910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431396g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_913477g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g42608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026269 No alias not classified & original description: CDS=1-1944 0.02 OrthoFinder output from all 47 species
Tin_g00864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 387 416
IPR001680 WD40_repeat 252 282
IPR001680 WD40_repeat 337 372
IPR001680 WD40_repeat 288 323
No external refs found!