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  5. Lfl_g13643

Lfl_g13643


Description : not classified & original description: none


Gene families : OG0001451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g13643

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00207790 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Als_g23877 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene69157.t1 Aspi01Gene69157 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056605 No alias not classified & original description: CDS=339-3572 0.03 OrthoFinder output from all 47 species
Ceric.33G001500.1 Ceric.33G001500 not classified & original description: pacid=50606915... 0.04 OrthoFinder output from all 47 species
Dcu_g05791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021121001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g20410.1 LOC_Os02g20410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435173g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g06798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c24_12770V3.1 Pp3c24_12770 Guanylate-binding family protein 0.01 OrthoFinder output from all 47 species
Pp3c24_12790V3.1 Pp3c24_12790 Guanylate-binding family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0216.g026042 No alias not classified & original description: CDS=152-2950 0.03 OrthoFinder output from all 47 species
Sam_g12052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077600.3.1 Solyc02g077600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g12795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP HCCA
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR003191 Guanylate-bd/ATL_C 309 612
IPR015894 Guanylate-bd_N 46 306
No external refs found!