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  5. Lfl_g13638

Lfl_g13638 (HBT, CDC27b)


Aliases : HBT, CDC27b

Description : component *(APC3) of (APC/C)-dependent ubiquitination arc lamp subcomplex & original description: none


Gene families : OG0008478 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0008478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g13638
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Ala_g37602 HBT, CDC27b component *(APC3) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 39 species
Dcu_g04928 HBT, CDC27b component *(APC3) of (APC/C)-dependent ubiquitination... 0.01 OrthoFinder output from all 39 species
Ore_g32538 HBT, CDC27b component *(APC3) of (APC/C)-dependent ubiquitination... 0.01 OrthoFinder output from all 39 species
Pir_g58692 HBT, CDC27b component *(APC3) of (APC/C)-dependent ubiquitination... 0.01 OrthoFinder output from all 39 species
Ppi_g07579 HBT, CDC27b component *(APC3) of (APC/C)-dependent ubiquitination... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013105 TPR_2 101 132
IPR001440 TPR_1 559 589
IPR001440 TPR_1 627 656
IPR019734 TPR_repeat 599 625
No external refs found!