AMTR_s00023p00243120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.213

Description : Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.ISU1/2/3 scaffold component


Gene families : OG_01_0002986 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002986_tree ,
OG_02_0002996 (LandPlants) Phylogenetic Tree(s): OG_02_0002996_tree ,
OG_03_0002762 (SeedPlants) Phylogenetic Tree(s): OG_03_0002762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00243120
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Gb_12436 No alias scaffold component ISU1/2/3 of mitochondrial ISC system... 0.05 Archaeplastida
Solyc03g112900.3.1 No alias scaffold component ISU1/2/3 of mitochondrial ISC system... 0.01 Archaeplastida
Zm00001e028002_P001 No alias scaffold component ISU1/2/3 of mitochondrial ISC system... 0.02 Archaeplastida
Gb_12436 No alias scaffold component ISU1/2/3 of mitochondrial ISC system... 0.05 LandPlants
Solyc03g112900.3.1 No alias scaffold component ISU1/2/3 of mitochondrial ISC system... 0.01 LandPlants
Gb_12436 No alias scaffold component ISU1/2/3 of mitochondrial ISC system... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002871 NIF_FeS_clus_asmbl_NifU_N 30 100
No external refs found!