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  5. Lfl_g13419

Lfl_g13419


Description : component *(eS30) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g13419
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00064720 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Adi_g093394 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g34461 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g65418 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.33 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre16.g666301 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01016902001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_16784 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Gb_23464 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Len_g35390 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.03 OrthoFinder output from all 47 species
Ppi_g24413 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g17534 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g35687 No alias component *(eS30) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008716 D-alanine-D-alanine ligase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 73 130
No external refs found!