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  5. Aop_g47009

Aop_g47009


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g47009
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Aop_g56011 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49978 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_00577 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Ppi_g43241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45124 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008612 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species
Zm00001e025028_P001 Zm00001e025028 Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002653 Znf_A20 20 43
No external refs found!