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  5. Lfl_g13128

Lfl_g13128


Description : PTP phosphatase *(LMW) & original description: none


Gene families : OG0005293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g13128
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00181660 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.tyrosine protein... 0.02 OrthoFinder output from all 47 species
Adi_g022199 No alias PTP phosphatase *(LMW) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031373001 No alias Protein modification.dephosphorylation.tyrosine protein... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44320.1 LOC_Os08g44320 PTP phosphatase (LMW) 0.02 OrthoFinder output from all 47 species
Mp6g16200.1 No alias PTP phosphatase (LMW) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR023485 Ptyr_pPase 98 251
No external refs found!