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  5. Aop_g45118

Aop_g45118


Description : not classified & original description: none


Gene families : OG0002495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g45118
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g01030.1 LOC_Os11g01030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g01020.1 LOC_Os12g01020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g07339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000795 synaptonemal complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007130 synaptonemal complex assembly IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070193 synaptonemal complex organization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!