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  5. Aop_g43718

Aop_g43718 (PDR6, ATPDR6)


Aliases : PDR6, ATPDR6

Description : not classified & original description: none


Gene families : OG0002595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002595_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g43718
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00192070 PDR6, ATPDR6,... ABC transporter G family member 34 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g39978 PDR6, ATPDR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35069 PEN3, ABCG36,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G068400.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.07 OrthoFinder output from all 47 species
Gb_33044 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g21350.1 PDR6, ATPDR6,... ABC transporter G family member 40 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10429293g0010 PEN3, ABCG36,... no description available(sp|h6ws93|pdr1_petax : 154.0) 0.02 OrthoFinder output from all 47 species
MA_218328g0010 PEN3, ABCG36,... ABC transporter G family member 36 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_396327g0010 PIS1, ABCG37,... ABC transporter G family member 37 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_640809g0010 PDR6, ATPDR6 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8453212g0010 PEN3, ABCG36,... Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Ore_g38382 PDR6, ATPDR6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61713 PDR6, ATPDR6 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g20933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44826 PDR6, ATPDR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52149 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 100 162
No external refs found!