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  5. MA_10432817g0010

MA_10432817g0010


Description : 33.99 development.unspecified Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. SHORT VEGETATIVE PHASE (SVP)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10432817g0010
Cluster HCCA cluster: Cluster_392

Target Alias Description ECC score Gene Family Method Actions
AT1G26310 AGL10, CAL1, CAL K-box region and MADS-box transcription factor family protein 0.02 Gene family
GSVIVT01018446001 No alias No description available 0.02 Gene family
GSVIVT01036549001 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os07g01820 Os07g0108900 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
MA_94049g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_9972589g0010 No alias No description available 0.02 Gene family
Solyc05g056620.2.1 Solyc05g056620.2 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 49
No external refs found!