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  5. Lfl_g12851

Lfl_g12851 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12851

Target Alias Description ECC score Gene Family Method Actions
Aev_g07998 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13747 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06416 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16617 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02392 No alias CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07423 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07073 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08505 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22501 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G061900.1 Ceric.07G061900 CAMTA-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.12G055700.1 CAMTA3, SR1,... CAMTA-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g06503 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23903 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46224 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010510001 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.05 OrthoFinder output from all 47 species
Gb_35291 No alias transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
LOC_Os07g30774.1 LOC_Os07g30774 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
LOC_Os10g22950.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.04 OrthoFinder output from all 47 species
Len_g11230 No alias CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437014g0010 No alias Calmodulin-binding transcription activator 2... 0.03 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12572 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18019 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19783 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010659 No alias CAMTA-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Spa_g30645 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035585_P001 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 973 991
IPR000048 IQ_motif_EF-hand-BS 997 1015
IPR005559 CG-1_dom 25 137
IPR002110 Ankyrin_rpt 762 851
IPR002909 IPT_dom 555 641
No external refs found!