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  5. Lfl_g12843

Lfl_g12843


Description : actin stability co-factor *(PMIR) & original description: none


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12843
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Adi_g105459 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g30343 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20246 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22592 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02621 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15578 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06081 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08736 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17688 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0059.g034625 No alias actin stability co-factor *(PMIR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g26453 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37984 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.32G018400.1 PMI1, Ceric.32G018400 actin stability co-factor *(PMIR) & original... 0.05 OrthoFinder output from all 47 species
Ceric.35G017200.1 Ceric.35G017200 actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g12279 No alias actin stability co-factor *(PMIR) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g22530 PMI1 actin stability factor *(PMI1) & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g24285 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04049 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13950 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41137 No alias actin stability factor *(PMI1) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g25860.1 No alias actin stability factor (PMI1/PMI15). actin stability... 0.03 OrthoFinder output from all 47 species
Msp_g19859 No alias actin stability co-factor *(PMIR) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g22563 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12254 No alias actin stability co-factor *(PMIR) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g12621 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10117 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53032 No alias actin stability co-factor *(PMIR) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g12547 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Smo444108 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.03 OrthoFinder output from all 47 species
Spa_g17949 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30544 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13997 No alias acTin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28063 No alias acTin stability co-factor *(PMIR) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e034908_P002 PMI1, Zm00001e034908 actin stability factor (PMI1/PMI15) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 220 340
No external refs found!