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  5. Aop_g41644

Aop_g41644


Description : not classified & original description: none


Gene families : OG0015010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g41644
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Ceric.11G030300.1 Ceric.11G030300 not classified & original description: pacid=50596628... 0.02 OrthoFinder output from all 47 species
Dde_g46797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35328 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12155 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01538 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 299 323
IPR002885 Pentatricopeptide_repeat 98 121
IPR002885 Pentatricopeptide_repeat 200 222
IPR002885 Pentatricopeptide_repeat 401 426
IPR002885 Pentatricopeptide_repeat 327 373
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 21 60
IPR002885 Pentatricopeptide_repeat 226 272
IPR002885 Pentatricopeptide_repeat 428 475
No external refs found!