MA_10432431g0010


Description : 27.1 RNA.processing SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein


Gene families : OG_01_0003922 (Gene family) Phylogenetic Tree(s): OG0003922_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10432431g0010
Cluster HCCA cluster: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AT1G14650 No alias SWAP (Suppressor-of-White-APricot)/surp... 0.02 Gene family
Cre06.g307450 No alias 27.1 RNA.processing SWAP... 0.02 Gene family
GSVIVT01012058001 No alias 27.1 RNA.processing SWAP... 0.06 Gene family
Smo146605 PACid_15403332 27.1 RNA.processing SWAP... 0.04 Gene family
Solyc02g081960.3.1 Solyc02g081960.3 27.1 RNA.processing SWAP... 0.03 Gene family
Zm00001d008293 GRMZM2G028156 27.1 RNA.processing SWAP... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
BP GO:0006396 RNA processing IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 774 839
IPR000061 Surp 101 152
IPR000061 Surp 227 278
IPR022030 SF3A1 297 512
No external refs found!