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  5. Lfl_g12576

Lfl_g12576


Description : component *(NOC3) of ribosomal-subunit proteome nuclear export complex & original description: none


Gene families : OG0006128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12576

Target Alias Description ECC score Gene Family Method Actions
Ceric.14G058300.1 Ceric.14G058300 component *(NOC3) of ribosomal-subunit proteome nuclear... 0.03 OrthoFinder output from all 47 species
Dcu_g15262 No alias component *(NOC3) of ribosomal-subunit proteome nuclear... 0.03 OrthoFinder output from all 47 species
GSVIVT01036806001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os06g30320.1 LOC_Os06g30320 component NOC3 of ribosomal subunit nuclear export complex 0.02 OrthoFinder output from all 47 species
MA_10437182g0040 No alias component NOC3 of ribosomal subunit nuclear export complex 0.02 OrthoFinder output from all 47 species
Mp1g19420.1 No alias component NOC3 of ribosomal subunit nuclear export complex 0.02 OrthoFinder output from all 47 species
Spa_g08009 No alias component *(NOC3) of ribosomal-subunit proteome nuclear... 0.03 OrthoFinder output from all 47 species
Tin_g29617 No alias component *(NOC3) of ribosomal-subunit proteome nuclear... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 600 757
IPR011501 Noc3_N 238 328
No external refs found!