Aop_g39282 (PUB26)

Aliases : PUB26

Description : U-Box-group-III E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g39282
Cluster	HCCA: Cluster_270

Target	Alias	Description	ECC score	Gene Family Method
AT3G02840	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G64660	CMPG2, ATCMPG2	CYS, MET, PRO, and GLY protein 2	0.05	OrthoFinder output from all 47 species
Adi_g003285	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g02187	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g05204	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06990	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g20026	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g12714	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g23185	CMPG1, ATCMPG1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g23643	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g30969	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g40105	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g60936	PUB25	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g62359	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g12417	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g16033	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g20185	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene55033.t1	PUB25, Aspi01Gene55033	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.07G004600.1	PUB26, Ceric.07G004600	E3 ubiquitin ligase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.08G042000.1	Ceric.08G042000	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G045400.1	Ceric.25G045400	not classified & original description: pacid=50593359...	0.04	OrthoFinder output from all 47 species
Ceric.27G047700.1	PUB8, B80,...	E3 ubiquitin ligase *(PUB8) & original description:...	0.03	OrthoFinder output from all 47 species
Cre03.g185750	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dac_g01592	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g07421	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11691	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g14303	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011139001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01011140001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01011616001	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_02629	No alias	U-box domain-containing protein 26 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Gb_02635	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_16228	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os02g34410.1	PUB25, LOC_Os02g34410	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Len_g01810	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10432813g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_17715g0010	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_311559g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_33190g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_58844g0020	PUB22	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_779502g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp3g11730.1	PUB25	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Mp7g11020.1	PUB25	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Nbi_g06628	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g21647	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33878	PUB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g38095	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42463	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19522	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011093	PUB23	not classified & original description: CDS=1-1278	0.03	OrthoFinder output from all 47 species
Solyc01g005160.4.1	Solyc01g005160	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007020.4.1	PUB23, Solyc01g007020	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007050.3.1	PUB24, Solyc01g007050	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g107980.3.1	PUB26, Solyc01g107980	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc04g071030.1.1	Solyc04g071030	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Solyc11g068940.1.1	PUB24, Solyc11g068940	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e000999_P001	Zm00001e000999	U-box domain-containing protein 20 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e006484_P001	PUB23, Zm00001e006484	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e014752_P001	PUB23, Zm00001e014752	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e014766_P001	CMPG2, ATCMPG2,...	E3 ubiquitin ligase (PUB)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	152	223

External Links

No external refs found!

Aop_g39282 (PUB26)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation