1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g38709

Aop_g38709 (ATIM)


Aliases : ATIM

Description : not classified & original description: none


Gene families : OG0005553 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005553_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g38709

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00055250 ATIM,... No description available 0.03 OrthoFinder output from all 47 species
Ceric.02G004400.1 ATIM, Ceric.02G004400 not classified & original description: pacid=50585680... 0.05 OrthoFinder output from all 47 species
Cre06.g284850 ATIM No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028757001 ATIM No description available 0.04 OrthoFinder output from all 47 species
Gb_19077 ATIM no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g11980.1 ATIM, LOC_Os05g11980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435367g0010 ATIM no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g22100.1 ATIM no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g08196 ATIM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g007800.3.1 ATIM, Solyc03g007800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g37319 ATIM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032472_P001 ATIM, Zm00001e032472 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006906 Timeless_N 62 321
No external refs found!