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  5. Aop_g38684

Aop_g38684


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g38684

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene06086.t1 HUA1, Aspi01Gene06086 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.20G050900.1 Ceric.20G050900 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G043900.1 ZFN1, Ceric.34G043900 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ehy_g14501 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017774001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Len_g17303 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Lfl_g16319 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Msp_g06264 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Solyc06g054620.4.1 Solyc06g054620 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g08367 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 164 188
IPR000571 Znf_CCCH 352 376
IPR000571 Znf_CCCH 304 329
IPR000571 Znf_CCCH 117 140
IPR000571 Znf_CCCH 70 95
No external refs found!