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  5. Lfl_g12479

Lfl_g12479 (SNX2b)


Aliases : SNX2b

Description : regulatory factor SNX2 of Retromer protein recycling complex & original description: none


Gene families : OG0001743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001743_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12479

Target Alias Description ECC score Gene Family Method Actions
Len_g45778 SNX2b regulatory factor SNX2 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species
Sam_g17271 No alias regulatory factor SNX2 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR015404 Vps5_C 391 625
IPR001683 PX_dom 245 324
No external refs found!