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  5. Lfl_g12476

Lfl_g12476


Description : component *(uS3) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000394 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12476

Target Alias Description ECC score Gene Family Method Actions
Aop_g11605 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Aop_g71347 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Aspi01Gene09649.t1 Aspi01Gene09649 component *(uS3) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ceric.12G046300.1 Ceric.12G046300 component *(uS3) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
LOC_Os07g41750.1 LOC_Os07g41750 component RPS3 of SSU proteome 0.01 OrthoFinder output from all 39 species
Msp_g00955 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Msp_g08961 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Pir_g11610 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Pp3c15_21360V3.1 Pp3c15_21360 Ribosomal protein S3 family protein 0.01 OrthoFinder output from all 39 species
Pp3c9_12170V3.1 Pp3c9_12170 Ribosomal protein S3 family protein 0.02 OrthoFinder output from all 39 species
Spa_g10672 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Spa_g30478 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 68 141
IPR001351 Ribosomal_S3_C 154 236
No external refs found!