- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : WTF1, AtWTF1
Description : plastidial RNA basal splicing factor *(WTF1) & original description: none
Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g37366 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00241290 | WTF1, AtWTF1,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22428 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G041500.1 | WTF1, AtWTF1,... | plastidial RNA basal splicing factor *(WTF1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g44157 | WTF1, AtWTF1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_34809 | WTF1, AtWTF1 | WTF1 plastidial RNA basal splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g49610.1 | WTF1, AtWTF1,... | WTF1 plastidial RNA basal splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Len_g11779 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_423098g0010 | WTF1, AtWTF1 | WTF1 plastidial RNA basal splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01340 | WTF1, AtWTF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09523 | WTF1, AtWTF1 | plastidial RNA basal splicing factor *(WTF1) & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021099 | PORR_domain | 69 | 394 |
| No external refs found! |