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  5. Aop_g36964

Aop_g36964


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g36964
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT2G13610 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT4G25750 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT5G52860 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Dcu_g25458 WBC19, ATWBC19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os06g30730.1 LOC_Os06g30730 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Lfl_g39649 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35579 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g43887 WBC19, ATWBC19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31857 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006110 No alias subfamily ABCG transporter & original description: CDS=1-2232 0.02 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc05g054890.4.1 Solyc05g054890 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc07g053300.1.1 Solyc07g053300 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37465 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e042020_P001 Zm00001e042020 ABC transporter G family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 76 228
IPR013525 ABC_2_trans 374 549
No external refs found!